PUBLICATIONS

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TADs and Chromatin loops detection

4. Chowdhury, H. M. A. M., Boult, T., & Oluwadare, O. (2024). Comparative study on chromatin loop callers using Hi-C data reveals their effectiveness. BMC Bioinformatics 25, 123 (2024).

3. Higgins, S., Akpokiro, V., Westcott, A. & Oluwadare, O. (2022). TADMaster: a comprehensive web-based tool for the analysis of topologically associated domains. BMC Bioinformatics 23, 463 (2022).

2. Trieu, Tuan*, Oluwadare, Oluwatosin*, Julia Wopata, and Jianlin Cheng. GenomeFlow: A Comprehensive Graphical Tool for Modeling and Analyzing 3D Genome Structure. Bioinformatics (2018). (* Co-first author)

1. Oluwadare, Oluwatosin, and Jianlin Cheng. ClusterTAD: an unsupervised machine learning approach to detecting topologically associated domains of chromosomes from Hi-C data. BMC bioinformatics 18.1 (2017): 480.